
fishbase_sources(): FishBase数据的来源、许可协议和匹配规则
Source:vignettes/articles/zh/reference/fishbase_sources.Rmd
fishbase_sources.Rmd英文原页:fishbase_sources()
说明
本函数列出本包使用的FishBase、SeaLifeBase和WoRMS数据的来源、适用的许可协议、引用方式、下载哪些数据表及其内容,以及fishbase_match()把FAO物种条目与这些数据匹配时所依据的规则(及其已发表的出处)。download_fishbase_data()会输出同样信息的摘要。
English
This function lists where the FishBase, SeaLifeBase and WoRMS data
used by the package come from, under which licence, how to cite them,
which tables are downloaded and what they hold, and the rules (with
their published sources) by which fishbase_match() matches
FAO species items to them. download_fishbase_data() prints
a summary of the same information.
用法
fishbase_sources(print = TRUE)返回值
以不可见方式返回一个数据框,每个数据来源、数据表或规则一行:type、item、description、source(引用或许可协议)和link。
English
Invisibly, a data frame with one row per data source, table or rule:
type, item, description,
source (citation or licence) and link.
参考文献
Boettiger, C., Lang, D.T. and Wainwright, P.C. (2012). rfishbase: exploring, manipulating and visualizing FishBase data from R. Journal of Fish Biology 81(6): 2030-2039. doi:10.1111/j.1095-8649.2012.03464.x. Source code: https://github.com/ropensci/rfishbase
Branch, T.A., Watson, R., Fulton, E.A. et al. (2010). The trophic fingerprint of marine fisheries. Nature 468: 431-435. doi:10.1038/nature09528
FAO (2026). Nomenclature, revision, and references of the ASFIS list (version 2026). Rome, FAO. https://www.fao.org/fishery/static/ASFIS/ASFIS_References_2026_EN.pdf
Froese, R. and Pauly, D. (Eds.) (2000). FishBase 2000: concepts, design and data sources. ICLARM, Los Baños, Philippines. https://www.fishbase.se/manual/fishbasethe_food_items_table.htm, https://www.fishbase.se/manual/fishbasethe_synonyms_table.htm
Froese, R. and Pauly, D. (Eds.) FishBase. World Wide Web electronic publication. https://www.fishbase.se
Liang, C. and Pauly, D. (2017). Fisheries impacts on China’s coastal ecosystems: unmasking a pervasive ‘fishing down’ effect. PLoS ONE 12: e0173296. doi:10.1371/journal.pone.0173296
Liang, C., Xian, W. and Pauly, D. (2018). Impacts of ocean warming on China’s fisheries catches: an application of “mean temperature of the catch” concept. Frontiers in Marine Science 5: 26. doi:10.3389/fmars.2018.00026
Palomares, M.L.D. and Pauly, D. (Eds.) SeaLifeBase. World Wide Web electronic publication. https://www.sealifebase.se
Pauly, D., Christensen, V., Dalsgaard, J., Froese, R. and Torres, F. (1998). Fishing down marine food webs. Science 279: 860-863. doi:10.1126/science.279.5352.860
Tsikliras, A.C. and Stergiou, K.I. (2014). Mean temperature of the catch increases quickly in the Mediterranean Sea. Marine Ecology Progress Series 515: 281-284. doi:10.3354/meps11005
WoRMS Editorial Board. World Register of Marine Species. Flanders Marine Institute (VLIZ). https://www.marinespecies.org, doi:10.14284/170